If you use data or tools from this website in your publication, please cite:
Triant DA, Walsh AT, Hartley GA, Petry B, Stegemiller MR, Nelson BM, McKendrick MM, Fuller EP, Cockett NE, Koltes JE, McKay SD, Green JA, Murdoch BM, Hagen DE, Elsik CG. AgAnimalGenomes: browsers for viewing and manually annotating farm animal genomes. Mamm Genome (2023). https://doi.org/10.1007/s00335-023-10008-1.
Also, please cite the genome and data sources for the tracks you used. For tissue-specific tracks, you should look up the associated BioProject accession in the JBrowse faceted track selector and then find the corresponding publication in the table below. PubMed ids in the table are linked to the PubMed pages at NCBI.
| Genome, Data Set or BioProject | Publication |
| ARS-UCD1.2 | Rosen BD, Bickhart DM, Schnabel RD, Koren S, Elsik CG, Tseng E, Rowan TN, Low WY, Zimin A, Couldrey C, Hall R, Li W, Rhie A, Ghurye J, McKay SD, Thibaud-Nissen F, Hoffman J, Murdoch BM, Snelling WM, McDaneld TG, Hammond JA, Schwartz JC, NandoloW, Hagen DE, Dreischer C, Schultheiss SJ, Schroeder SG, Phillippy AM, Cole JB, Van Tassell CP, Liu G, Smith TPL, Medrano JF. De novo assembly of the cattle reference genome with single-molecule sequencing. Gigascience. 2020 Mar 1;9(3):giaa021. doi: 10.1093/gigascience/giaa021. PMID: 32191811; PMCID: PMC7081964. |
| ARS-UI_Ramb_v2.0 | Davenport KM, Bickhart DM, Worley K, Murali SC, Salavati M, Clark EL, Cockett NE, Heaton MP, Smith TPL, Murdoch BM, Rosen BD. An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome. Gigascience. 2022 Feb 4;11:giab096. doi: 10.1093/gigascience/giab096. PMID: 35134925; PMCID: PMC8848310. |
| ARS1 | Bickhart DM, Rosen BD, Koren S, Sayre BL, Hastie AR, Chan S, Lee J, Lam ET, Liachko I, Sullivan ST, Burton JN, Huson HJ, Nystrom JC, Kelley CM, Hutchison JL, Zhou Y, Sun J, Crisà A, Ponce de León FA, Schwartz JC, Hammond JA, Waldbieser GC, Schroeder SG, Liu GE, Dunham MJ, Shendure J, Sonstegard TS, Phillippy AM, Van Tassell CP, Smith TP. Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome. Nat Genet. 2017 Apr;49(4):643-650. doi: 10.1038/ng.3802. Epub 2017 Mar 6. PMID: 28263316; PMCID: PMC5909822. |
| EquCab3.0 | Kalbfleisch TS, Rice ES, DePriest MS Jr, Walenz BP, Hestand MS, Vermeesch JR, O Connell BL, Fiddes IT, Vershinina AO, Saremi NF, Petersen JL, Finno CJ, Bellone RR, McCue ME, Brooks SA, Bailey E, Orlando L, Green RE, Miller DC, Antczak DF, MacLeod JN. Improved reference genome for the domestic horse increases assembly contiguity and composition. Commun Biol. 2018 Nov 16;1:197. doi: 10.1038/s42003-018-0199-z. PMID: 30456315; PMCID: PMC6240028. |
| GRCg6a | Warren WC, Hillier LW, Tomlinson C, Minx P, Kremitzki M, Graves T, Markovic C, Bouk N, Pruitt KD, Thibaud-Nissen F, Schneider V, Mansour TA, Brown CT, Zimin A, Hawken R, Abrahamsen M, Pyrkosz AB, Morisson M, Fillon V, Vignal A, Chow W, Howe K, Fulton JE, Miller MM, Lovell P, Mello CV, Wirthlin M, Mason AS, Kuo R, Burt DW, Dodgson JB, Cheng HH. A New Chicken Genome Assembly Provides Insight into Avian Genome Structure. G3 (Bethesda). 2017 Jan 5;7(1):109-117. doi: 10.1534/g3.116.035923. PMID: 27852011; PMCID: PMC5217101. |
| NDDB_SH_1 | Not published. |
| Sscrofa11.1 | Warr A, Affara N, Aken B, Beiki H, Bickhart DM, Billis K, Chow W, Eory L, Finlayson HA, Flicek P, Girón CG, Griffin DK, Hall R, Hannum G, Hourlier T, Howe K, Hume DA, IzuoguO, Kim K, Koren S, Liu H, Manchanda N, Martin FJ, Nonneman DJ, O'Connor RE, PhillippyAM, Rohrer GA, Rosen BD, Rund LA, Sargent CA, Schook LB, Schroeder SG, Schwartz AS, Skinner BM, Talbot R, Tseng E, Tuggle CK, Watson M, Smith TPL, Archibald AL. An improved pig reference genome sequence to enable pig genetics and genomics research. Gigascience. 2020 Jun 1;9(6):giaa051. doi: 10.1093/gigascience/giaa051. PMID: 32543654; PMCID: PMC7448572. |
| Ensembl Genes | Yates AD, Allen J, Amode RM, Azov AG, Barba M, Becerra A, Bhai J, Campbell LI, Carbajo Martinez M, Chakiachvili M, Chougule K, Christensen M, Contreras-Moreira B, Cuzick A, Da Rin Fioretto L, Davis P, De Silva NH, Diamantakis S, Dyer S, Elser J, Filippi CV, Gall A, Grigoriadis D, Guijarro-Clarke C, Gupta P, Hammond-Kosack KE, Howe KL, Jaiswal P, Kaikala V, Kumar V, Kumari S, Langridge N, Le T, Luypaert M, Maslen GL, Maurel T, Moore B, Muffato M, Mushtaq A, Naamati G, Naithani S, Olson A, Parker A, Paulini M, Pedro H, Perry E, Preece J, Quinton-Tulloch M, Rodgers F, Rosello M, Ruffier M, Seager J, Sitnik V, Szpak M, Tate J, Tello-Ruiz MK, Trevanion SJ, Urban M, Ware D, Wei S, Williams G, Winterbottom A, Zarowiecki M, Finn RD, Flicek P. Ensembl Genomes 2022: an expanding genome resource for non-vertebrates. Nucleic Acids Res. 2022 Jan 7;50(D1):D996-D1003. doi: 10.1093/nar/gkab1007. PMID: 34791415; PMCID: PMC8728113. |
| RefSeq Genes | O'Leary NA, Wright MW, Brister JR, Ciufo S, Haddad D, McVeigh R, Rajput B, Robbertse B, Smith-White B, Ako-Adjei D, Astashyn A, Badretdin A, Bao Y, Blinkova O, Brover V, Chetvernin V, Choi J, Cox E, Ermolaeva O, Farrell CM, Goldfarb T, Gupta T, Haft D, Hatcher E, Hlavina W, Joardar VS, Kodali VK, Li W, Maglott D, Masterson P, McGarvey KM, Murphy MR, O'Neill K, Pujar S, Rangwala SH, Rausch D, Riddick LD, Schoch C, Shkeda A, Storz SS, Sun H, Thibaud-Nissen F, Tolstoy I, Tully RE, Vatsan AR, Wallin C, Webb D, Wu W, Landrum MJ, Kimchi A, Tatusova T, DiCuccio M, Kitts P, Murphy TD, Pruitt KD. Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation. Nucleic Acids Res. 2016 Jan 4;44(D1):D733-45. doi: 10.1093/nar/gkv1189. Epub 2015 Nov 8. PMID: 26553804; PMCID: PMC4702849. |
| SNP (bovine, chicken, goat, horse, pig) | Yates AD, Allen J, Amode RM, Azov AG, Barba M, Becerra A, Bhai J, Campbell LI, Carbajo Martinez M, Chakiachvili M, Chougule K, Christensen M, Contreras-Moreira B, Cuzick A, Da Rin Fioretto L, Davis P, De Silva NH, Diamantakis S, Dyer S, Elser J, Filippi CV, Gall A, Grigoriadis D, Guijarro-Clarke C, Gupta P, Hammond-Kosack KE, Howe KL, Jaiswal P, Kaikala V, Kumar V, Kumari S, Langridge N, Le T, Luypaert M, Maslen GL, Maurel T, Moore B, Muffato M, Mushtaq A, Naamati G, Naithani S, Olson A, Parker A, Paulini M, Pedro H, Perry E, Preece J, Quinton-Tulloch M, Rodgers F, Rosello M, Ruffier M, Seager J, Sitnik V, Szpak M, Tate J, Tello-Ruiz MK, Trevanion SJ, Urban M, Ware D, Wei S, Williams G, Winterbottom A, Zarowiecki M, Finn RD, Flicek P. Ensembl Genomes 2022: an expanding genome resource for non-vertebrates. Nucleic Acids Res. 2022 Jan 7;50(D1):D996-D1003. doi: 10.1093/nar/gkab1007. PMID: 34791415; PMCID: PMC8728113. |
| SNP (sheep) | Cezard T, Cunningham F, Hunt SE, Koylass B, Kumar N, Saunders G, Shen A, Silva AF, Tsukanov K, Venkataraman S, Flicek P, Parkinson H, Keane TM. The European Variation Archive: a FAIR resource of genomic variation for all species. Nucleic Acids Res. 2022 Jan 7;50(D1):D1216-D1220. doi: 10.1093/nar/gkab960. PMID: 34718739; PMCID: PMC8728205. |
| QTL | Hu ZL, Park CA, Reecy JM. Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services. Nucleic Acids Res. 2022 Jan 7;50(D1):D956-D961. doi: 10.1093/nar/gkab1116. PMID: 34850103; PMCID: PMC8728226. |
| PRJEB12891 | Kuo RI, Tseng E, Eory L, Paton IR, Archibald AL, Burt DW. Normalized long read RNA sequencing in chicken reveals transcriptome complexity similar to human. BMC Genomics. 2017 Apr 24;18(1):323. doi: 10.1186/s12864-017-3691-9. PMID: 28438136; PMCID: PMC5404281. |
| PRJEB14330 | Kern C, Wang Y, Chitwood J, Korf I, Delany M, Cheng H, Medrano JF, Van Eenennaam AL, Ernst C, Ross P, Zhou H. Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species. BMC Genomics. 2018 Sep 18;19(1):684. doi: 10.1186/s12864-018-5037-7. PMID: 30227846; PMCID: PMC6145346. |
| PRJEB19199 | Clark EL, Bush SJ, McCulloch MEB, Farquhar IL, Young R, Lefevre L, Pridans C, Tsang HG, Wu C, Afrasiabi C, Watson M, Whitelaw CB, Freeman TC, Summers KM, Archibald AL, Hume DA. A high resolution atlas of gene expression in the domestic sheep (Ovis aries). PLoSGenet. 2017 Sep 15;13(9):e1006997. doi: 10.1371/journal.pgen.1006997. PMID: 28915238; PMCID: PMC5626511. Bush SJ, McCulloch MEB, Muriuki C, Salavati M, Davis GM, Farquhar IL, Lisowski ZM, Archibald AL, Hume DA, Clark EL. Comprehensive Transcriptional Profiling of the Gastrointestinal Tract of Ruminants from Birth to Adulthood Reveals Strong Developmental Stage Specific Gene Expression. G3 (Bethesda). 2019 Feb 7;9(2):359-373. doi: 10.1534/g3.118.200810. PMID: 30530642; PMCID: PMC6385975. |
| PRJEB19268 | Derks MFL, Lopes MS, Bosse M, Madsen O, Dibbits B, Harlizius B, Groenen MAM, MegensHJ. Balancing selection on a recessive lethal deletion with pleiotropic effects on two neighboring genes in the porcine genome. PLoS Genet. 2018 Sep 19;14(9):e1007661. doi: 10.1371/journal.pgen.1007661. PMID: 30231021; PMCID: PMC6166978. |
| PRJEB19386 | Warr A, Affara N, Aken B, Beiki H, Bickhart DM, Billis K, Chow W, Eory L, Finlayson HA, Flicek P, Girón CG, Griffin DK, Hall R, Hannum G, Hourlier T, Howe K, Hume DA, IzuoguO, Kim K, Koren S, Liu H, Manchanda N, Martin FJ, Nonneman DJ, O'Connor RE, PhillippyAM, Rohrer GA, Rosen BD, Rund LA, Sargent CA, Schook LB, Schroeder SG, Schwartz AS, Skinner BM, Talbot R, Tseng E, Tuggle CK, Watson M, Smith TPL, Archibald AL. An improved pig reference genome sequence to enable pig genetics and genomics research. Gigascience. 2020 Jun 1;9(6):giaa051. doi: 10.1093/gigascience/giaa051. PMID: 32543654; PMCID: PMC7448572. |
| PRJEB23196 | Bush SJ, McCulloch MEB, Muriuki C, Salavati M, Davis GM, Farquhar IL, Lisowski ZM, Archibald AL, Hume DA, Clark EL. Comprehensive Transcriptional Profiling of the Gastrointestinal Tract of Ruminants from Birth to Adulthood Reveals Strong Developmental Stage Specific Gene Expression. G3 (Bethesda). 2019 Feb 7;9(2):359-373. doi: 10.1534/g3.118.200810. PMID: 30530642; PMCID: PMC6385975. Muriuki C, Bush SJ, Salavati M, McCulloch MEB, Lisowski ZM, Agaba M, Djikeng A, Hume DA, Clark EL. A Mini-Atlas of Gene Expression for the Domestic Goat (Capra hircus). Front Genet. 2019 Nov 4;10:1080. doi: 10.3389/fgene.2019.01080. PMID: 31749840; PMCID: PMC6844187. |
| PRJEB25226 | Young R, Lefevre L, Bush SJ, Joshi A, Singh SH, Jadhav SK, Dhanikachalam V, LisowskiZM, Iamartino D, Summers KM, Williams JL, Archibald AL, Gokhale S, Kumar S, Hume DA. A Gene Expression Atlas of the Domestic Water Buffalo (Bubalus bubalis). Front Genet. 2019 Jul 24;10:668. doi: 10.3389/fgene.2019.00668. PMID: 31428126; PMCID: PMC6689995. |
| PRJEB25677 | Chamberlain AJ, Vander Jagt CJ, Hayes BJ, Khansefid M, Marett LC, Millen CA, Nguyen TT, Goddard ME. Extensive variation between tissues in allele specific expression in an outbred mammal. BMC Genomics. 2015 Nov 23;16:993. doi: 10.1186/s12864-015-2174-0. PMID: 26596891; PMCID: PMC4657355. |
| PRJEB26787 | Gao S, Nanaei HA, Wei B, Wang Y, Wang X, Li Z, Dai X, Wang Z, Jiang Y, Shao J. Comparative Transcriptome Profiling Analysis Uncovers Novel Heterosis-Related Candidate Genes Associated with Muscular Endurance in Mules. Animals (Basel). 2020 Jun 4;10(6):980. doi: 10.3390/ani10060980. PMID: 32512843; PMCID: PMC7341310. |
| PRJEB27111 | Foissac S, Djebali S, Munyard K, Vialaneix N, Rau A, Muret K, Esquerré D, Zytnicki M, Derrien T, Bardou P, Blanc F, Cabau C, Crisci E, Dhorne-Pollet S, Drouet F, Faraut T, Gonzalez I, Goubil A, Lacroix-Lamandé S, Laurent F, Marthey S, Marti-Marimon M, Momal-Leisenring R, Mompart F, Quéré P, Robelin D, Cristobal MS, Tosser-Klopp G, Vincent-Naulleau S, Fabre S, Pinard-Van der Laan MH, Klopp C, Tixier-Boichard M, Acloque H, Lagarrigue S, Giuffra E. Multi-species annotation of transcriptome and chromatin structure in domesticated animals. BMC Biol. 2019 Dec 30;17(1):108. doi: 10.1186/s12915-019-0726-5. PMID: 31884969; PMCID: PMC6936065. |
| PRJEB27455 | Foissac S, Djebali S, Munyard K, Vialaneix N, Rau A, Muret K, Esquerré D, Zytnicki M, Derrien T, Bardou P, Blanc F, Cabau C, Crisci E, Dhorne-Pollet S, Drouet F, Faraut T, Gonzalez I, Goubil A, Lacroix-Lamandé S, Laurent F, Marthey S, Marti-Marimon M, Momal-Leisenring R, Mompart F, Quéré P, Robelin D, Cristobal MS, Tosser-Klopp G, Vincent-Naulleau S, Fabre S, Pinard-Van der Laan MH, Klopp C, Tixier-Boichard M, Acloque H, Lagarrigue S, Giuffra E. Multi-species annotation of transcriptome and chromatin structure in domesticated animals. BMC Biol. 2019 Dec 30;17(1):108. doi: 10.1186/s12915-019-0726-5. PMID: 31884969; PMCID: PMC6936065. |
| PRJEB34570 | Nolte W, Weikard R, Brunner RM, Albrecht E, Hammon HM, Reverter A, Kühn C. Biological Network Approach for the Identification of Regulatory Long Non-Coding RNAs Associated With Metabolic Efficiency in Cattle. Front Genet. 2019 Nov 22;10:1130. doi: 10.3389/fgene.2019.01130. PMID: 31824560; PMCID: PMC6883949. |
| PRJEB35127 | Dorji J, Vander Jagt CJ, Garner JB, Marett LC, Mason BA, Reich CM, Xiang R, Clark EL, Cocks BG, Chamberlain AJ, MacLeod IM, Daetwyler HD. Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle. BMC Genomics. 2020 Oct 19;21(1):720. doi: 10.1186/s12864-020-07018-7. Erratum in: BMC Genomics. 2022 Apr 20;23(1):315. PMID: 33076826; PMCID: PMC7574280. |
| PRJEB35307 | Kingsley NB, Kern C, Creppe C, Hales EN, Zhou H, Kalbfleisch TS, MacLeod JN, Petersen JL, Finno CJ, Bellone RR. Functionally Annotating Regulatory Elements in the Equine Genome Using Histone Mark ChIP-Seq. Genes (Basel). 2019 Dec 18;11(1):3. doi: 10.3390/genes11010003. PMID: 31861495; PMCID: PMC7017286. |
| PRJEB37735 | Pan Z, Yao Y, Yin H, Cai Z, Wang Y, Bai L, Kern C, Halstead M, Chanthavixay G, Trakooljul N, Wimmers K, Sahana G, Su G, Lund MS, Fredholm M, Karlskov-Mortensen P, Ernst CW, Ross P, Tuggle CK, Fang L, Zhou H. Pig genome functional annotation enhances the biological interpretation of complex traits and human disease. Nat Commun. 2021 Oct 6;12(1):5848. doi: 10.1038/s41467-021-26153-7. PMID: 34615879; PMCID: PMC8494738. |
| PRJEB42315 | Kingsley NB, Hamilton NA, Lindgren G, Orlando L, Bailey E, Brooks S, McCue M, Kalbfleisch TS, MacLeod JN, Petersen JL, Finno CJ, Bellone RR. "Adopt-a-Tissue" Initiative Advances Efforts to Identify Tissue-Specific Histone Marks in the Mare. Front Genet. 2021 Mar 26;12:649959. doi: 10.3389/fgene.2021.649959. PMID: 33841506; PMCID: PMC8033197. |
| PRJEB4351 | Low WY, Tearle R, Bickhart DM, Rosen BD, Kingan SB, Swale T, Thibaud-Nissen F, Murphy TD, Young R, Lefevre L, Hume DA, Collins A, Ajmone-Marsan P, Smith TPL, Williams JL. Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity. Nat Commun. 2019 Jan 16;10(1):260. doi: 10.1038/s41467-018-08260-0. PMID: 30651564; PMCID: PMC6335429. |
| PRJEB6169 | Clark EL, Bush SJ, McCulloch MEB, Farquhar IL, Young R, Lefevre L, Pridans C, Tsang HG, Wu C, Afrasiabi C, Watson M, Whitelaw CB, Freeman TC, Summers KM, Archibald AL, Hume DA. A high resolution atlas of gene expression in the domestic sheep (Ovis aries). PLoSGenet. 2017 Sep 15;13(9):e1006997. doi: 10.1371/journal.pgen.1006997. PMID: 28915238; PMCID: PMC5626511. |
| PRJNA204941 | McCarthy FM, Pendarvis K, Cooksey AM, Gresham CR, Bomhoff M, Davey S, Lyons E, Sonstegard TS, Bridges SM, Burgess SC. Chickspress: a resource for chicken gene expression. Database (Oxford). 2019 Jan 1;2019:baz058. doi: 10.1093/database/baz058. PMID: 31210271; PMCID: PMC6556980. |
| PRJNA263600 | Triant DA, Le Tourneau JJ, Diesh CM, Unni DR, Shamimuzzaman M, Walsh AT, Gardiner J, Goldkamp AK, Li Y, Nguyen HN, Roberts C, Zhao Z, Alexander LJ, Decker JE, Schnabel RD, Schroeder SG, Sonstegard TS, Taylor JF, Rivera RM, Hagen DE, Elsik CG. Using online tools at the Bovine Genome Database to manually annotate genes in the new reference genome. Anim Genet. 2020 Oct;51(5):675-682. doi: 10.1111/age.12962. Epub 2020 Jun 14. PMID: 32537769; PMCID: PMC7540445. |
| PRJNA294306 | Triant DA, Le Tourneau JJ, Diesh CM, Unni DR, Shamimuzzaman M, Walsh AT, Gardiner J, Goldkamp AK, Li Y, Nguyen HN, Roberts C, Zhao Z, Alexander LJ, Decker JE, Schnabel RD, Schroeder SG, Sonstegard TS, Taylor JF, Rivera RM, Hagen DE, Elsik CG. Using online tools at the Bovine Genome Database to manually annotate genes in the new reference genome. Anim Genet. 2020 Oct;51(5):675-682. doi: 10.1111/age.12962. Epub 2020 Jun 14. PMID: 32537769; PMCID: PMC7540445. |
| PRJNA311523 | Li M, Chen L, Tian S, Lin Y, Tang Q, Zhou X, Li D, Yeung CKL, Che T, Jin L, Fu Y, Ma J, Wang X, Jiang A, Lan J, Pan Q, Liu Y, Luo Z, Guo Z, Liu H, Zhu L, Shuai S, Tang G, Zhao J, Jiang Y, Bai L, Zhang S, Mai M, Li C, Wang D, Gu Y, Wang G, Lu H, Li Y, Zhu H, Li Z, Li M, Gladyshev VN, Jiang Z, Zhao S, Wang J, Li R, Li X. Comprehensive variation discovery and recovery of missing sequence in the pig genome using multiple de novo assemblies. Genome Res. 2017 May;27(5):865-874. doi: 10.1101/gr.207456.116. Epub 2016 Sep 19. PMID: 27646534; PMCID: PMC5411780. |
| PRJNA379574 | Triant DA, Le Tourneau JJ, Diesh CM, Unni DR, Shamimuzzaman M, Walsh AT, Gardiner J, Goldkamp AK, Li Y, Nguyen HN, Roberts C, Zhao Z, Alexander LJ, Decker JE, Schnabel RD, Schroeder SG, Sonstegard TS, Taylor JF, Rivera RM, Hagen DE, Elsik CG. Using online tools at the Bovine Genome Database to manually annotate genes in the new reference genome. Anim Genet. 2020 Oct;51(5):675-682. doi: 10.1111/age.12962. Epub 2020 Jun 14. PMID: 32537769; PMCID: PMC7540445. |
| PRJNA414087 | Davenport KM, Bickhart DM, Worley K, Murali SC, Salavati M, Clark EL, Cockett NE, Heaton MP, Smith TPL, Murdoch BM, Rosen BD. An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome. Gigascience. 2022 Feb 4;11:giab096. doi: 10.1093/gigascience/giab096. PMID: 35134925; PMCID: PMC8848310. |
| PRJNA665193 | Kern C, Wang Y, Xu X, Pan Z, Halstead M, Chanthavixay G, Saelao P, Waters S, Xiang R, Chamberlain A, Korf I, Delany ME, Cheng HH, Medrano JF, Van Eenennaam AL, Tuggle CK, Ernst C, Flicek P, Quon G, Ross P, Zhou H. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nat Commun. 2021 Mar 23;12(1):1821. doi: 10.1038/s41467-021-22100-8. PMID: 33758196; PMCID: PMC7988148. |
| PRJNA665194 | Kern C, Wang Y, Xu X, Pan Z, Halstead M, Chanthavixay G, Saelao P, Waters S, Xiang R, Chamberlain A, Korf I, Delany ME, Cheng HH, Medrano JF, Van Eenennaam AL, Tuggle CK, Ernst C, Flicek P, Quon G, Ross P, Zhou H. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nat Commun. 2021 Mar 23;12(1):1821. doi: 10.1038/s41467-021-22100-8. PMID: 33758196; PMCID: PMC7988148. |
| PRJNA665196 | Kern C, Wang Y, Xu X, Pan Z, Halstead M, Chanthavixay G, Saelao P, Waters S, Xiang R, Chamberlain A, Korf I, Delany ME, Cheng HH, Medrano JF, Van Eenennaam AL, Tuggle CK, Ernst C, Flicek P, Quon G, Ross P, Zhou H. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nat Commun. 2021 Mar 23;12(1):1821. doi: 10.1038/s41467-021-22100-8. PMID: 33758196; PMCID: PMC7988148. |
| PRJNA665197 | Kern C, Wang Y, Xu X, Pan Z, Halstead M, Chanthavixay G, Saelao P, Waters S, Xiang R, Chamberlain A, Korf I, Delany ME, Cheng HH, Medrano JF, Van Eenennaam AL, Tuggle CK, Ernst C, Flicek P, Quon G, Ross P, Zhou H. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nat Commun. 2021 Mar 23;12(1):1821. doi: 10.1038/s41467-021-22100-8. PMID: 33758196; PMCID: PMC7988148. |
| PRJNA665199 | Kern C, Wang Y, Xu X, Pan Z, Halstead M, Chanthavixay G, Saelao P, Waters S, Xiang R, Chamberlain A, Korf I, Delany ME, Cheng HH, Medrano JF, Van Eenennaam AL, Tuggle CK, Ernst C, Flicek P, Quon G, Ross P, Zhou H. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nat Commun. 2021 Mar 23;12(1):1821. doi: 10.1038/s41467-021-22100-8. PMID: 33758196; PMCID: PMC7988148. |
| PRJNA665209 | Kern C, Wang Y, Xu X, Pan Z, Halstead M, Chanthavixay G, Saelao P, Waters S, Xiang R, Chamberlain A, Korf I, Delany ME, Cheng HH, Medrano JF, Van Eenennaam AL, Tuggle CK, Ernst C, Flicek P, Quon G, Ross P, Zhou H. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nat Commun. 2021 Mar 23;12(1):1821. doi: 10.1038/s41467-021-22100-8. PMID: 33758196; PMCID: PMC7988148. |
| PRJNA665212 | Kern C, Wang Y, Xu X, Pan Z, Halstead M, Chanthavixay G, Saelao P, Waters S, Xiang R, Chamberlain A, Korf I, Delany ME, Cheng HH, Medrano JF, Van Eenennaam AL, Tuggle CK, Ernst C, Flicek P, Quon G, Ross P, Zhou H. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nat Commun. 2021 Mar 23;12(1):1821. doi: 10.1038/s41467-021-22100-8. PMID: 33758196; PMCID: PMC7988148. |
| PRJNA665214 | Kern C, Wang Y, Xu X, Pan Z, Halstead M, Chanthavixay G, Saelao P, Waters S, Xiang R, Chamberlain A, Korf I, Delany ME, Cheng HH, Medrano JF, Van Eenennaam AL, Tuggle CK, Ernst C, Flicek P, Quon G, Ross P, Zhou H. Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research. Nat Commun. 2021 Mar 23;12(1):1821. doi: 10.1038/s41467-021-22100-8. PMID: 33758196; PMCID: PMC7988148. |